BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A09SP1|AL426307
(817 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 1601 0.0
>3x_Contig1737
Length = 17214
Score = 1601 bits (803), Expect = 0.0
Identities = 810/817 (99%)
Strand = Plus / Minus
Query: 1 actcattctttccttgacaaactatcatgtaagckctactgcagcraaactaactacggc 60
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 5652 actcattctttccttgacaaactatcatgtaagctctactgcagcaaaactaactacggc 5593
Query: 61 actatcctctatcgacatcagaatgaagcaatgagcaactagctctggcctttcagcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5592 actatcctctatcgacatcagaatgaagcaatgagcaactagctctggcctttcagcaaa 5533
Query: 121 catcactgtgccttgaaaaatgcgctatgggaaccccactcgatggatgatggggcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5532 catcactgtgccttgaaaaatgcgctatgggaaccccactcgatggatgatggggcaaca 5473
Query: 181 aaaagcaggtgtcaaatctgagttctgagttcggtgatttgattctcacgattaaacctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5472 aaaagcaggtgtcaaatctgagttctgagttcggtgatttgattctcacgattaaacctt 5413
Query: 241 tctctatgccagagatacacacagctcagcagctcactgtgtcattatccattggttacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5412 tctctatgccagagatacacacagctcagcagctcactgtgtcattatccattggttacc 5353
Query: 301 agataagttatgtwaggttttgccaagagaaatgagcagcaaaacagatactctaaaaga 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5352 agataagttatgtaaggttttgccaagagaaatgagcagcaaaacagatactctaaaaga 5293
Query: 361 aacgatggtgaagtggcttcgtttccgtaaggttcctggaaagaacactcgctattacgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5292 aacgatggtgaagtggcttcgtttccgtaaggttcctggaaagaacactcgctattacgg 5233
Query: 421 aggttcattatccatggaccaaagatcccagacaaacttcatttctcttgctggaggaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5232 aggttcattatccatggaccaaagatcccagacaaacttcatttctcttgctggaggaag 5173
Query: 481 agctgagactgagagtatatatatwttwgtwggcatacatatatccgcttgattccgggg 540
|||||||||||||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 5172 agctgagactgagagtatatatatattagtaggcatacatatatccgcttgattccgggg 5113
Query: 541 tcgtctcgactgttcaattccagtwattcaatagatcgtccagtaattcagcagaccgtc 600
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5112 tcgtctcgactgttcaattccagtaattcaatagatcgtccagtaattcagcagaccgtc 5053
Query: 601 cagttttctatcgggttgtgttactcgaagcgtattttcaacgttgcaaccaacagtgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5052 cagttttctatcgggttgtgttactcgaagcgtattttcaacgttgcaaccaacagtgat 4993
Query: 661 aaaagacttttccgataaggtcaacagaacttgagcttttctgtctagcataggccatgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4992 aaaagacttttccgataaggtcaacagaacttgagcttttctgtctagcataggccatgg 4933
Query: 721 ttccatcgcgataaaggaaaattagtcatcgttgatcgtctggtataagaaggtttgcct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4932 ttccatcgcgataaaggaaaattagtcatcgttgatcgtctggtataagaaggtttgcct 4873
Query: 781 tttgtatatcattcttggtagtatccggtagttctca 817
|||||||||||||||||||||||||||||||||||||
Sbjct: 4872 tttgtatatcattcttggtagtatccggtagttctca 4836
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4765
Number of Sequences: 1807
Number of extensions: 4765
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 817
length of database: 10,358,551
effective HSP length: 16
effective length of query: 801
effective length of database: 10,329,639
effective search space: 8274040839
effective search space used: 8274040839
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)